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Commit 82fbfdbd authored by la_29's avatar la_29
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code to generate figure 3

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sz = [100,100];
cx = sz./2;
imCN = zeros(sz);
imSSF = zeros(sz);
for i = 1 : sz(1)
for j = 1 : sz(2)
cyto = i./sz(1);
nuc = j./sz(2);
imCN(i,j) = cyto./nuc;
imSSF(i,j) = cyto - nuc;
end
end
clf;imagesc(imCN)
xt = get(gca,'xtick')
set(gca,'xticklabels',xt./sz(2))
yt = get(gca,'ytick')
set(gca,'yticklabels',yt./sz(1))
ylabel('cytoplasmic intensity')
xlabel('nuclear intensity')
% tick_targets = [1,64,128,192,255];
cb = colorbar()
cb.Label.String = 'cytonuclear ratio'
exportgraphics(gcf,'imCN.png')
clf;imagesc(imSSF)
xt = get(gca,'xtick')
set(gca,'xticklabels',xt./sz(2))
yt = get(gca,'ytick')
set(gca,'yticklabels',yt./sz(1))
ylabel('cytoplasmic intensity')
xlabel('nuclear intensity')
tick_targets = [-0.99,-0.5,0,0.5,0.99];
tick_labels = [-1,-0.5,0,0.5,1];
cb = colorbar('ticks',tick_targets,'ticklabels',tick_labels)
cb.Label.String = 'SSF'
exportgraphics(gcf,'imSSF.png')
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