Format README

README.md

-*******************************************************************************
-*  Copyright 2014 Andrew Cohen, Eric Wait, and Mark Winter
-*  This file is part of LEVER 3-D - the tool for 5-D stem cell segmentation,
-*  tracking, and lineaging. See http://bioimage.coe.drexel.edu 'software'
-*  section for details. LEVER 3-D is free software: you can redistribute it
-*  and/or modify it under the terms of the GNU General Public License as
-*  published by the Free Software Foundation, either version 3 of the License,
-*  or (at your option) any later version.
-*  LEVER 3-D is distributed in the hope that it will be useful, but WITHOUT ANY
-*  WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
-*  FOR A PARTICULAR PURPOSE.  See the GNU General Public License for more
-*  details.
-*  You should have received a copy of the GNU General Public License along with
-*  LEVer in file "gnu gpl v3.txt".  If not, see 
-*  <http://www.gnu.org/licenses/>.
-*******************************************************************************
+Copyright 2014 Andrew Cohen, Eric Wait, and Mark Winter
+
+This file is part of LEVER 3-D - the tool for 5-D stem cell segmentation,
+tracking, and lineaging. See [Bioimage](http://bioimage.coe.drexel.edu/info/?page_id=620] for details.
+LEVER 3-D is free software: you can redistribute it and/or modify it under the
+terms of the GNU General Public License as published by the Free Software Foundation,
+either version 3 of the License, or (at your option) any later version.
+LEVER 3-D is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
+without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+See the GNU General Public License for more details. You should have received a
+copy of the GNU General Public License along with LEVer in file "gnu gpl v3.txt".
+If not, see [GNU](http://www.gnu.org/licenses/).
 
 NVIDIA CUDA toolkit EULA can be found at [CUDA EULA](http://docs.nvidia.com/cuda/eula/index.html#axzz3EoF66FNY)
 
 To run LEVER 3-D executable you will need the following:
-
 MATLAB's runtime called MCR [version 8.3 (R2014a)](http://www.mathworks.com/products/compiler/mcr/index.html)
-
 Visual C++ Redistributable for [Visual Studio 2013](http://www.microsoft.com/en-us/download/details.aspx?id=40784)
 
-DirectX 11 runtime (for Windows 7, no need on Windows 8) and capable device [DirectX 11](http://www.microsoft.com/en-
-us/download/details.aspx?id=35)
+DirectX 11 runtime (for Windows 7, no need on Windows 8) and capable device
+[DirectX 11](http://www.microsoft.com/en-us/download/details.aspx?id=35)
 
 To process images you will need:
 A CUDA compute 3.5 capable device or better
@@ -35,9 +29,9 @@ Once all of the above prerequisites have been met, run the LEVER3D.exe from the
 
 The program will open and ask for a metadata file.  Please see example dataset [here](http://bioimage.coe.drexel.edu/info/?page_id=620)
 
-The metadata needs to be in the same directory as the tiff files.  The tiff
-files need to be named such that the following sprintf line will find each file
-`sprintf('%s_c%02d_t%04d_z%04d.tif',datasetName,channel,frame,zSlice)`
+The metadata needs to be in the same directory as the tiff files.
+The tiff files need to be named such that the following sprintf line will find
+each file `sprintf('%s_c%02d_t%04d_z%04d.tif',datasetName,channel,frame,zSlice)`
+
+Please see 'Additional Files 3' of BMC paper for a video tutorial of the user interface.
 
-Please see 'Additional Files 3' of BMC paper for a video tutorial of the user
-interface.