Made README a markdown document

README → README.md

@@ -15,31 +15,29 @@
 *  <http://www.gnu.org/licenses/>.
 *******************************************************************************
 
-NVIDIA CUDA toolkit EULA can be found at
-http://docs.nvidia.com/cuda/eula/index.html#axzz3EoF66FNY
-
-To run LEVER 3-D executable you will need the following: MATLAB's runtime called
-MCR (version 8.3 (R2014a)
-http://www.mathworks.com/products/compiler/mcr/index.html) Visual C++
-Redistributable for Visual Studio 2012 (http://www.microsoft.com/en-
-us/download/details.aspx?id=30679) DirectX 11 runtime (for Windows 7, no need on
-Windows 8) and capable device (http://www.microsoft.com/en-
+NVIDIA CUDA toolkit EULA can be found at [CUDA EULA](http://docs.nvidia.com/cuda/eula/index.html#axzz3EoF66FNY)
+
+To run LEVER 3-D executable you will need the following:
+
+MATLAB's runtime called MCR [version 8.3 (R2014a)](http://www.mathworks.com/products/compiler/mcr/index.html)
+
+Visual C++ Redistributable for [Visual Studio 2013](http://www.microsoft.com/en-us/download/details.aspx?id=40784)
+
+DirectX 11 runtime (for Windows 7, no need on Windows 8) and capable device [DirectX 11](http://www.microsoft.com/en-
 us/download/details.aspx?id=35)
 
 To process images you will need:
 A CUDA compute 3.5 capable device or better
 
-Once all of the above prerequisites have been met, run the LEVER3D.exe from
-the same directory as:
-DefaultMeshShaders.fx
-ViewAlignedVertexShader.fx
+Once all of the above prerequisites have been met, run the LEVER3D.exe from the same directory as:
+`DefaultMeshShaders.fx`
+`ViewAlignedVertexShader.fx`
 
-The program will open and ask for a metadata file.  Please see example dataset 
-on http://bioimage.coe.drexel.edu in the 'Software' section.
+The program will open and ask for a metadata file.  Please see example dataset [here](http://bioimage.coe.drexel.edu/info/?page_id=620)
 
 The metadata needs to be in the same directory as the tiff files.  The tiff
 files need to be named such that the following sprintf line will find each file
-sprintf('%s_c%02d_t%04d_z%04d.tif',datasetName,channel,frame,zSlice)
+`sprintf('%s_c%02d_t%04d_z%04d.tif',datasetName,channel,frame,zSlice)`
 
 Please see 'Additional Files 3' of BMC paper for a video tutorial of the user
 interface.