Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
L
ljsctc
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Model registry
Operate
Environments
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
GitLab community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
OpenSource
ljsctc
Commits
4f9e44d8
Commit
4f9e44d8
authored
Jun 14, 2021
by
ac (tb)
Browse files
Options
Downloads
Patches
Plain Diff
added ctc_doc/readme.txt
parent
61ed9f19
Branches
Branches containing commit
No related tags found
No related merge requests found
Changes
2
Show whitespace changes
Inline
Side-by-side
Showing
2 changed files
.gitignore
+1
-0
1 addition, 0 deletions
.gitignore
ctc_doc/readme.txt
+28
-0
28 additions, 0 deletions
ctc_doc/readme.txt
with
29 additions
and
0 deletions
.gitignore
+
1
−
0
View file @
4f9e44d8
...
...
@@ -6,3 +6,4 @@ ctc/importExport/generatedBats/*.bat
*.m~
ljs_git_out.tmp
mccExcludedFiles.log
!ctc_doc/readme.txt
\ No newline at end of file
This diff is collapsed.
Click to expand it.
ctc_doc/readme.txt
0 → 100644
+
28
−
0
View file @
4f9e44d8
leverjs software fo cell tracking challenge 2021 second submission
primary and secondary tracks
layton aho, raymond yung and andrew r. cohen
andrew.r.cohen@drexel.edu
June, 2021
NOTES
- the uploaded executables have been modified to use Linux .sh files. the implementation is tested on Ubuntu 20.04.
prerequisites:
- matlab 2019b mcr runtime is assumed to be installed in '/usr/local/MATLAB/MATLAB_Runtime/v97'. if this is not the correct path,
the .sh files will need to be modified easily with the correct path or possibly a softlink could be added.
the runtime is available here:
https://ssd.mathworks.com/supportfiles/downloads/R2019b/Release/8/deployment_files/installer/complete/glnxa64/MATLAB_Runtime_R2019b_Update_8_glnxa64.zip
- mpich is required: 'sudo apt install mpich'
performance notes:
- running any batch script for the first time will cause *all* of the movies to be imported to the LEVER format and denoised. this is going to
be quite slow, but it will only happen once.
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
sign in
to comment