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Commit 66a6eb22 authored by ac_22's avatar ac_22
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getImages msLog 0.7:1.1, movieDistance commit

parent 569f0f7a
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......@@ -54,7 +54,7 @@ for idp=0:ceil(CONSTANTS.imageData.NumberOfFrames/p.NumWorkers)-1
updateDistance.setDouble(3,dx(i,3));
Write.tryUpdateDB(updateDistance);
end
commit(conn);
time=time+p.NumWorkers;
elapsedTime=toc(d1);
ljsLog(sprintf('movieDistance time=%d: elapsed=%0.1f seconds',time,elapsedTime),5);
......
......@@ -89,9 +89,6 @@ end
% allocateShake (below) assigns each discarded pixel to it's closest
% touching segmentation using a morphological region fill
bw=Segment.aiAreaOpen(bw,min_radius_pixels);
% if ~segParams.isPhase
% bw=bw|imfill(bw,'holes');
% end
bw2=bw;
bPhaseReduce=segParams.isPhase || segParams.bCytoplasmic;
% if prod(size(im))>1e9
......
......@@ -117,7 +117,7 @@ end
function imLog=msLog(im,min_radius_pixels)
logScale=[0.25:0.25:1.25];
logScale=[0.7:0.1:1.2];
imLogCombined=[];
if length(min_radius_pixels)==3 && min_radius_pixels(3)>0
% 3d
......
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