draw_ssf_kymo for 3d

matlab/+SSF/draw_ssf_kymo.m

+
+function imq = draw_ssf_kymo(strKymoFile)
+
+targetChannels = 1;
+imKymo = SSF.loadImage(strKymoFile,targetChannels);
+
+imp = imKymo;
+imp(imp<0)=0;
+imp = max(imp,[],1);
+imp = SSF.quantize8(imp);
+
+imn = imKymo;
+imn(imn>0)=0;
+imn=abs(imn);
+imn = max(imn,[],1);
+imn = SSF.quantize8(imn);
+
+imq(:,:,1) = squeeze(imp);
+imq(:,:,2) = squeeze(imn);
+imq(:,:,3) = 0*imp;
+
+

matlab/+SSF/quantize8.m

 % clipLimits = [minVal,maxVal];
-function im = quantize8(im,clipLimits)
+function [im, clipLimits] = quantize8(im,clipLimits)
 
 if isa(im,'uint8')
     return
 end
+
+if ~exist('clipLimits','var')
+    clipLimits = [min(im(:)), max(im(:))];
+end
 im = max(im,clipLimits(1));
 im = min(im,clipLimits(2));