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OpenSource
leverjs
Commits
280c120e
Commit
280c120e
authored
Mar 16, 2018
by
Andrew Cohen
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defaults for FrameSegment_dpFUCCI
parent
1b5da9c1
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matlab/+Segment/FrameSegment_dpFUCCI.m
+3
-5
3 additions, 5 deletions
matlab/+Segment/FrameSegment_dpFUCCI.m
prebuilt/matlabAlgorithms.json
+1
-1
1 addition, 1 deletion
prebuilt/matlabAlgorithms.json
prebuilt/matlabPollDB.exe
+2
-2
2 additions, 2 deletions
prebuilt/matlabPollDB.exe
with
6 additions
and
8 deletions
matlab/+Segment/FrameSegment_dpFUCCI.m
+
3
−
5
View file @
280c120e
function
Cells
=
FrameSegment_dpFUCCI
(
conn
,
t
,
CONSTANTS
,
args
)
function
Cells
=
FrameSegment_dpFUCCI
(
conn
,
t
,
CONSTANTS
,
args
)
Cells
=
[];
Cells
=
[];
segParams
=
[];
segParams
=
[];
segParams
.
draw
=
tru
e
;
segParams
.
draw
=
fals
e
;
segParams
.
minimumRadius_um
=
1
5
;
segParams
.
minimumRadius_um
=
1
0
;
segParams
.
channels
=
1
;
segParams
.
channels
=
1
;
if
nargin
==
4
if
nargin
==
4
segParams
=
Segment
.
getParams
(
segParams
,
args
);
segParams
=
Segment
.
getParams
(
segParams
,
args
);
...
@@ -14,7 +13,6 @@ end
...
@@ -14,7 +13,6 @@ end
global
DRAW
global
DRAW
DRAW
=
segParams
.
draw
;
DRAW
=
segParams
.
draw
;
tic
;
tic
;
resolution_um
=
CONSTANTS
.
imageData
.
PixelPhysicalSize
(
1
);
% um per pixel
resolution_um
=
CONSTANTS
.
imageData
.
PixelPhysicalSize
(
1
);
% um per pixel
...
@@ -86,7 +84,7 @@ for n=1:num
...
@@ -86,7 +84,7 @@ for n=1:num
end
end
tElapsed
=
toc
;
tElapsed
=
toc
;
fprintf
(
1
,
'segmented frame %d found %d hulls, time=%f\n'
,
t
,
chan
,
length
(
Cells
),
tElapsed
);
fprintf
(
1
,
'segmented frame %d found %d hulls, time=%f\n'
,
t
,
length
(
Cells
),
tElapsed
);
if
DRAW
if
DRAW
title
([
num2str
(
tElapsed
,
'%0.0f'
)
'seconds'
]);
title
([
num2str
(
tElapsed
,
'%0.0f'
)
'seconds'
]);
drawnow
drawnow
...
...
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prebuilt/matlabAlgorithms.json
LFS
+
1
−
1
View file @
280c120e
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prebuilt/matlabPollDB.exe
LFS
+
2
−
2
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280c120e
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