Use cmake for build

.gitignore

@@ -24,27 +24,16 @@ Thumbs.db
 *.ilk
 *.log
 *.sbr
-obj/
-_ReSharper*/
-[Tt]est[Rr]esult*
-src/c/Intermediate/*
-src/c/Output/*
-src/c/ipch/*
-src/c/packages.config
-src/c/packages/
-bin/Release_x64/CudaImageProccessing.lib
-src/c/CudaImageProccessing.sdf
-src/c/CudaMex.mexw64
-src/MATLAB/cudart32_55.dll
-src/MATLAB/cudart64_55.dll
-src/c/CudaImageProccessing.opensdf
-src/c/CudaImageProccessing.sdf
-src/c/CudaImageProccessing.v11.suo
 *.asv
 *.~
 *.VC.db
 *.opendb
 
+# Ignore CMake cache and build directiories (assume build*/)
+CmakeCache.txt
+build*/
+**/CMakeFiles
+
 # Ignore pycache folder
 **/__pycache__/
 

CMakeLists.txt

+cmake_minimum_required(VERSION 3.15.0)
+cmake_policy(VERSION 3.15)
+
+project(HydraImageProcessor LANGUAGES C CXX CUDA)
+
+set(HYDRA_MODULE_NAME "HIP")
+
+# NOTE: Use CUDACXX (gcc/clang) or -T cuda=<cuda_toolkit> (vs)
+# TODO: Try to make selection simpler with cmake 3.17's FindCUDAToolkit?
+find_package(CUDA REQUIRED)
+find_package(OpenMP REQUIRED)
+
+find_package(Matlab)
+find_package(Python COMPONENTS Development NumPy)
+
+# Setup backend Hydra CUDA library (static) for cuda building
+add_subdirectory(src/c/Cuda)
+
+# Setup MEX interface if Matlab was found
+if ( Matlab_FOUND )
+    add_subdirectory(src/c/Mex)
+endif()
+
+# Setup Python interface if Python3 found
+if ( Python_FOUND )
+    add_subdirectory(src/c/Python)
+endif()

src/c/Cuda/CMakeLists.txt

+# Setup backend Hydra CUDA library (static) for cuda building
+add_library(HydraCudaLib STATIC "")
+
+target_compile_features(HydraCudaLib PRIVATE cxx_std_11 cuda_std_11)
+target_link_libraries(HydraCudaLib PRIVATE OpenMP::OpenMP_CXX)
+
+# Set a variable to turn on/off PROCESS_MUTEX support
+set(USE_PROCESS_MUTEX ON CACHE BOOL "Use process-level mutex to guard GPU calls")
+
+# Complie compute architectures
+# NOTE: Comment out some of these to speed up builds if you know your hardware capabilities
+string(APPEND CMAKE_CUDA_FLAGS " -gencode=arch=compute_30,code=sm_30")
+string(APPEND CMAKE_CUDA_FLAGS " -gencode=arch=compute_35,code=sm_35")
+string(APPEND CMAKE_CUDA_FLAGS " -gencode=arch=compute_50,code=sm_50")
+string(APPEND CMAKE_CUDA_FLAGS " -gencode=arch=compute_52,code=sm_52")
+string(APPEND CMAKE_CUDA_FLAGS " -gencode=arch=compute_60,code=sm_60")
+string(APPEND CMAKE_CUDA_FLAGS " -gencode=arch=compute_61,code=sm_61")
+string(APPEND CMAKE_CUDA_FLAGS " -gencode=arch=compute_70,code=compute_70")
+
+set_target_properties(HydraCudaLib
+    PROPERTIES 
+        POSITION_INDEPENDENT_CODE ON
+        CUDA_SEPARABLE_COMPILATION ON
+        CUDA_RESOLVE_DEVICE_SYMBOLS ON)
+
+target_sources(HydraCudaLib
+    PUBLIC
+        BufferConversions.h
+        CHelpers.h
+        CommandLineProgress.h
+        CudaDeviceInfo.h
+        CudaDeviceStats.h
+        CudaUtilities.h
+        CWrapperAutogen.h
+        CWrappers.h
+        Defines.h
+        ImageChunk.h
+        ImageView.h
+        KernelGenerators.h
+        Vec.h
+
+    PRIVATE
+        CudaAddTwoImages.cuh
+        CudaClosure.cuh
+        CudaDeviceCount.cuh
+        CudaDeviceImages.cuh
+        CudaElementWiseDifference.cuh
+        CudaEntropyFilter.cuh
+        CudaGaussian.cuh
+        CudaGetMinMax.cuh
+        CudaHighPassFilter.cuh
+        CudaIdentityFilter.cuh
+        CudaImageContainer.cuh
+        CudaImageContainerClean.cuh
+        CudaLoG.cuh
+        CudaMaxFilter.cuh
+        CudaMeanAndVariance.cuh
+        CudaMeanFilter.cuh
+        CudaMedianFilter.cuh
+        CudaMemoryStats.cuh
+        CudaMinFilter.cuh
+        CudaMinMax.cuh
+        CudaMultiplySum.cuh
+        CudaNLMeans.cuh
+        CudaOpener.cuh
+        CudaStdFilter.cuh
+        CudaSum.cuh
+        CudaVarFilter.cuh
+        CudaWienerFilter.cuh
+        ImageDimensions.cuh
+        Kernel.cuh
+        KernelIterator.cuh
+        SeparableMultiplySum.cuh
+
+        CHelpers.cpp
+        CudaDeviceInfo.cpp
+        CudaDeviceStats.cpp
+        CudaUtilities.cpp
+        GaussianKernel.cpp
+        ImageChunk.cpp
+        LoGKernel.cpp
+
+        CWrapperAutogen.cu
+        CWrappers.cu
+        Kernel.cu
+        KernelIterator.cu
+)
+
+target_include_directories(HydraCudaLib 
+    PUBLIC
+        $<INSTALL_INTERFACE:include>
+        $<BUILD_INTERFACE:${CMAKE_CURRENT_LIST_DIR}>
+        $<BUILD_INTERFACE:${CMAKE_CURRENT_LIST_DIR}/..>
+    PRIVATE
+        ${CMAKE_CUDA_TOOLKIT_INCLUDE_DIRECTORIES}
+)

src/c/Mex/CMakeLists.txt

+# Setup MEX interface if Matlab was found
+add_library(HydraMex MODULE "")
+
+# Require c++11 and set build definition to MEX_BUILD
+target_compile_features(HydraMex PRIVATE cxx_std_11)
+target_compile_definitions(HydraMex PRIVATE MEX_BUILD)
+
+# Set USE_PROCESS_MUTEX if cmake variable is set
+if ( USE_PROCESS_MUTEX )
+    target_compile_definitions(HydraMex PRIVATE USE_PROCESS_MUTEX)
+endif()
+
+# Link against Matlab libraries
+target_link_libraries(HydraMex PRIVATE HydraCudaLib ${Matlab_MX_LIBRARY} ${Matlab_MEX_LIBRARY})
+
+# Change output library name to Hydra.mex<plaform>
+set_target_properties(HydraMex
+    PROPERTIES
+        OUTPUT_NAME ${HYDRA_MODULE_NAME}
+        PREFIX ""
+        SUFFIX .${Matlab_MEX_EXTENSION}
+        POSITION_INDEPENDENT_CODE ON
+)
+
+# Setup Matlab include directories
+target_include_directories(HydraMex PRIVATE ${Matlab_INCLUDE_DIRS})
+
+# Setup src include directories
+target_include_directories(HydraMex
+    PRIVATE
+        $<INSTALL_INTERFACE:include>
+        $<BUILD_INTERFACE:${CMAKE_CURRENT_LIST_DIR}>
+        $<BUILD_INTERFACE:${CMAKE_CURRENT_LIST_DIR}/..>
+        $<BUILD_INTERFACE:${CMAKE_CURRENT_LIST_DIR}/../ScriptCmds>
+)
+
+# Include module definition file for Windows
+if ( WIN32 )
+    target_sources(HydraMex PRIVATE HydraMex.def)
+endif()
+
+target_sources(HydraMex
+    PRIVATE
+        MexArgConverter.h
+        MexIncludes.h
+        MexTypes.h
+
+        ../mph/const_string.h
+        ../mph/integer_sequence.h
+        ../mph/preproc_helper.h
+        ../mph/qualifier_helpers.h
+        ../mph/tuple_helpers.h
+
+        ../ScriptCmds/ArgConverter.h
+        ../ScriptCmds/GenCommands.h
+        ../ScriptCmds/HydraConfig.h
+        ../ScriptCmds/LinkageTraitTfms.h
+        ../ScriptCmds/ScopedProcessMutex.h
+        ../ScriptCmds/ScriptCommand.h
+        ../ScriptCmds/ScriptCommandDefines.h
+        ../ScriptCmds/ScriptCommandImpl.h
+        ../ScriptCmds/ScriptCommandModule.h
+        ../ScriptCmds/ScriptCommands.h
+        ../ScriptCmds/ScriptHelpers.h
+        ../ScriptCmds/ScriptIncludes.h
+        ../ScriptCmds/ScriptioMaps.h
+        ../ScriptCmds/ScriptTraits.h
+        ../ScriptCmds/ScriptTraitTfms.h
+
+        ../ScriptCmds/Commands/ScrCmdCheckConfig.h
+        ../ScriptCmds/Commands/ScrCmdClosure.h
+        ../ScriptCmds/Commands/ScrCmdDeviceCount.h
+        ../ScriptCmds/Commands/ScrCmdDeviceStats.h
+        ../ScriptCmds/Commands/ScrCmdElementWiseDifference.h
+        ../ScriptCmds/Commands/ScrCmdEntropyFilter.h
+        ../ScriptCmds/Commands/ScrCmdGaussian.h
+        ../ScriptCmds/Commands/ScrCmdGetMinMax.h
+        ../ScriptCmds/Commands/ScrCmdHelp.h
+        ../ScriptCmds/Commands/ScrCmdHighPassFilter.h
+        ../ScriptCmds/Commands/ScrCmdIdentityFilter.h
+        ../ScriptCmds/Commands/ScrCmdInfo.h
+        ../ScriptCmds/Commands/ScrCmdLoG.h
+        ../ScriptCmds/Commands/ScrCmdMaxFilter.h
+        ../ScriptCmds/Commands/ScrCmdMeanFilter.h
+        ../ScriptCmds/Commands/ScrCmdMedianFilter.h
+        ../ScriptCmds/Commands/ScrCmdMinFilter.h
+        ../ScriptCmds/Commands/ScrCmdMultiplySum.h
+        ../ScriptCmds/Commands/ScrCmdNLMeans.h
+        ../ScriptCmds/Commands/ScrCmdOpener.h
+        ../ScriptCmds/Commands/ScrCmdStdFilter.h
+        ../ScriptCmds/Commands/ScrCmdSum.h
+        ../ScriptCmds/Commands/ScrCmdVarFilter.h
+        ../ScriptCmds/Commands/ScrCmdWienerFilter.h
+
+        ../ScriptCmds/ScopedProcessMutex.cpp
+        MexCommandModule.cpp
+        HydraMexModule.cpp
+)

src/c/Python/CMakeLists.txt

+# Setup MEX interface if Matlab was found
+add_library(HydraPy MODULE "")
+
+# Require c++11 and set build definition to PY_BUILD
+target_compile_features(HydraPy PRIVATE cxx_std_11)
+target_compile_definitions(HydraPy PRIVATE PY_BUILD)
+
+# Set USE_PROCESS_MUTEX if cmake variable is set
+if ( USE_PROCESS_MUTEX )
+    target_compile_definitions(HydraPy PRIVATE USE_PROCESS_MUTEX)
+endif()
+
+# Link against Python and NumPy libraries
+target_link_libraries(HydraPy PRIVATE HydraCudaLib Python::Python Python::NumPy)
+
+# Change output library name to Hydra.<dll/so/dylib>
+set_target_properties(HydraPy
+    PROPERTIES
+        OUTPUT_NAME ${HYDRA_MODULE_NAME}
+        PREFIX ""
+        POSITION_INDEPENDENT_CODE ON
+)
+
+# On windows specifically set the suffix to .pyd
+if ( WIN32 )
+    set_target_properties(HydraPy PROPERTIES SUFFIX .pyd)
+endif()
+
+# Setup Python/NumPy include directories
+target_include_directories(HydraPy PRIVATE Python::Python Python::NumPy)
+
+# Setup src include directories
+target_include_directories(HydraPy
+    PRIVATE
+        $<INSTALL_INTERFACE:include>
+        $<BUILD_INTERFACE:${CMAKE_CURRENT_LIST_DIR}>
+        $<BUILD_INTERFACE:${CMAKE_CURRENT_LIST_DIR}/..>
+        $<BUILD_INTERFACE:${CMAKE_CURRENT_LIST_DIR}/../ScriptCmds>
+        $<BUILD_INTERFACE:${CMAKE_CURRENT_LIST_DIR}/../external>
+)
+
+target_sources(HydraPy
+    PRIVATE
+        PyArgConverter.h
+        PyIncludes.h
+        PyTypes.h
+
+        ../mph/const_string.h
+        ../mph/integer_sequence.h
+        ../mph/preproc_helper.h
+        ../mph/qualifier_helpers.h
+        ../mph/tuple_helpers.h
+
+        ../ScriptCmds/ArgConverter.h
+        ../ScriptCmds/GenCommands.h
+        ../ScriptCmds/HydraConfig.h
+        ../ScriptCmds/LinkageTraitTfms.h
+        ../ScriptCmds/ScopedProcessMutex.h
+        ../ScriptCmds/ScriptCommand.h
+        ../ScriptCmds/ScriptCommandDefines.h
+        ../ScriptCmds/ScriptCommandImpl.h
+        ../ScriptCmds/ScriptCommandModule.h
+        ../ScriptCmds/ScriptCommands.h
+        ../ScriptCmds/ScriptHelpers.h
+        ../ScriptCmds/ScriptIncludes.h
+        ../ScriptCmds/ScriptioMaps.h
+        ../ScriptCmds/ScriptTraits.h
+        ../ScriptCmds/ScriptTraitTfms.h
+
+        ../ScriptCmds/Commands/ScrCmdCheckConfig.h
+        ../ScriptCmds/Commands/ScrCmdClosure.h
+        ../ScriptCmds/Commands/ScrCmdDeviceCount.h
+        ../ScriptCmds/Commands/ScrCmdDeviceStats.h
+        ../ScriptCmds/Commands/ScrCmdElementWiseDifference.h
+        ../ScriptCmds/Commands/ScrCmdEntropyFilter.h
+        ../ScriptCmds/Commands/ScrCmdGaussian.h
+        ../ScriptCmds/Commands/ScrCmdGetMinMax.h
+        ../ScriptCmds/Commands/ScrCmdHelp.h
+        ../ScriptCmds/Commands/ScrCmdHighPassFilter.h
+        ../ScriptCmds/Commands/ScrCmdIdentityFilter.h
+        ../ScriptCmds/Commands/ScrCmdInfo.h
+        ../ScriptCmds/Commands/ScrCmdLoG.h
+        ../ScriptCmds/Commands/ScrCmdMaxFilter.h
+        ../ScriptCmds/Commands/ScrCmdMeanFilter.h
+        ../ScriptCmds/Commands/ScrCmdMedianFilter.h
+        ../ScriptCmds/Commands/ScrCmdMinFilter.h
+        ../ScriptCmds/Commands/ScrCmdMultiplySum.h
+        ../ScriptCmds/Commands/ScrCmdNLMeans.h
+        ../ScriptCmds/Commands/ScrCmdOpener.h
+        ../ScriptCmds/Commands/ScrCmdStdFilter.h
+        ../ScriptCmds/Commands/ScrCmdSum.h
+        ../ScriptCmds/Commands/ScrCmdVarFilter.h
+        ../ScriptCmds/Commands/ScrCmdWienerFilter.h
+
+        ../ScriptCmds/ScopedProcessMutex.cpp
+        HydraPyModule.cpp
+        PyCommandModule.cpp
+)