Large rewrite to move around column major

src/MATLAB/tiffReader.m

src/MATLAB/tiffWriter.m

src/c/Common/CHelpers.cpp

src/c/Common/CudaKernels.cuh

src/c/Common/CudaProcessBuffer.cuh

src/c/Common/CudaStorageBuffer.cuh

src/c/Common/ImageContainer.cpp

src/c/Common/ImageContainer.h

src/c/Common/Process.cu

src/c/Common/Process.h

src/c/Common/ROI.cpp

src/c/Common/ROI.h

src/c/Common/VecFuncs.h

src/c/CudaMex.vcxproj

src/c/CudaMex.vcxproj.filters

src/c/CudaMex/AddConstant.cpp

src/c/CudaMex/AddImageWith.cpp

src/c/CudaMex/ApplyPolyTransformation.cpp

src/c/CudaMex/CalculateMinMax.cpp

src/c/CudaMex/ContrastEnhancement.cpp