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OpenSource
AxonTracker
Commits
b1a06f4a
Commit
b1a06f4a
authored
Jun 21, 2012
by
mark
Committed by
Mark Winter
Oct 14, 2014
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Old segmentation fixes.
parent
23bf7ef3
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Changes
2
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2 changed files
matlab/GenerateStats43.m
+5
-1
5 additions, 1 deletion
matlab/GenerateStats43.m
matlab/NewGoSegmentIt.m
+6
-6
6 additions, 6 deletions
matlab/NewGoSegmentIt.m
with
11 additions
and
7 deletions
matlab/GenerateStats43.m
+
5
−
1
View file @
b1a06f4a
...
...
@@ -80,6 +80,8 @@ for i=startidx:endidx
trackingStruct
.
umppix
=
0.18
;
trackingStruct
.
spfrm
=
0.650
;
trackingStruct
=
rebuildLookupTables
(
trackingStruct
);
plotConnect
(
trackingStruct
,
5
,
5
);
%axis([0 (numframes-1)*trackingStruct.spfrm 0 kymoArcLength*trackingStruct.umppix]);
...
...
@@ -94,3 +96,5 @@ for i=startidx:endidx
j
=
j
+
1
;
end
dataset
=
[
movielist
(
dsetmap
)
.
datasetnum
];
\ No newline at end of file
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matlab/NewGoSegmentIt.m
+
6
−
6
View file @
b1a06f4a
...
...
@@ -92,12 +92,12 @@ for t=1: NFRAMES
%rcPKS{t}=[rpk cpk];
[
L
num
]
=
bwlabel
(
bwi
,
4
);
hold
off
;
imagesc
(
imhfreq
);
hold
on
%hold off;imagesc(im);hold on
[
r
c
]
=
find
(
bwi
);
plot
(
c
,
r
,
'.g'
);
[
r
c
]
=
find
(
bwMax
);
plot
(
c
,
r
,
'.r'
);
%
hold off;imagesc(imhfreq);hold on
%
%hold off;imagesc(im);hold on
%
[r c] = find(bwi);
%
plot(c,r,'.g');
%
[r c] = find(bwMax);
%
plot(c,r,'.r');
%
%
...
...
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