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  • gmm-thread
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  • ij-opencv
  • ij-rand-ellipses
  • ij-replicates
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Created with Raphaël 2.2.01Feb20Jun4Aug32128Jul27262523222120191817151413Update README.mdmastermasterUpdate LICENSEadded note to readme on convergence. matlab version checks for fail to converge. updated de2bi to dec2bin to use matlab built in.added README.txt for ImageJ pluginadded JAR file with latest OpenCV Java bindingsremoved JAR files for old OpenCV bindingsMerge branch 'ij-opencv'cleaned up codeij-opencvij-opencvMostly working with the official OpenCV java bindingscommit pycacheMerge branch 'master' of git-bioimage.coe.drexel.edu:opensource/PixelReppython .idea commitPython PixelRep with RNG seeding and zero-matrix meansReplace test image with string 'FILENAME'-Initialize opencv rng by iterating generator random-n times prior to training dataImageJ distance map using OpenCV java bindingstrying to convert to the official opencv java bindingsadded relicates and numiters to guiij-replicatesij-replicatestweaked types to try to account for roundoff and conversion errorsonly train on 10% of the pointsrun gmm REPLICATES times and pick the best scoring resultmore debugging of broken thread codegmm-threadgmm-threadrun multiple replicates with random meansattempt to run the gmms in threads. not workingfolder restruct 3/3changed from filter to a normal ImageJ pluginij-rand-ellipsesij-rand-ellipsesmultiple changes:Added distribution sampling when direct pixel replication would produce over a million points.more attempts to fix the random ellipse codeImageJ plugin to create and segment random ellipsesMerge remote-tracking branch 'origin/master'Updated Python files in srcx folderMoved python files to srcx folderPixelReplicate was over written this commit brings it back to the n-dimensional version.Added python to SRC folderMerge remote-tracking branch 'origin/master'simulate with different kfolder restructure take 2Merge remote-tracking branch 'origin/master'python files with comments
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