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README.md

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    • README.md 717 B

    This is the source code repository for the paper "Segmenting Touching Cells"

    The manuscript is currently under review. This software is intended only for the selected reviewers to evaluate. It is not licensed for download or use.

    After the manuscript is accepted the software will be released free and open source.

    USAGE run src/MATLAB/demoPR.m to see the generic pixel replication usage

    src/ImageJ - the ImageJ plugin

    src/Python - Python implementation

    src/MATLAB/3D - a 3D version

    src/MATLAB/DistributionSampling - a more efficient implementation (useful for larger connected components

    src/PerformanceCharacterization - quantitive comparison of different algorithms on simulated elllipse data