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source code from "Axonal transport analysis using Multitemporal Association Tracking." Int J Comput Biol Drug Des. 2012;5(1):35-48.

Cuda Kernels with Mex wrapper to process 3-D images

source code from E. Wait, et al., Visualization and Correction of Automated Segmentation, Tracking and Lineaging from 5-D Stem Cell Image Sequences. BMC Bioinformatics, 2014.

helper functions for image read/write and import.